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Mystery Monday Returns

Welcome back! the new school year has started for most, if not all, people by now. Everyone is busily trying to figure out new schedules, new curricula, new people, sometimes even new schools. Changes are everywhere this time of year. Paleoaerie is no exception. We didn’t get quite as much done over the summer as we would have liked (does anyone?), but it was an interesting summer, filled with good and bad. To start with the bad, the UALR web design course that was initially going to work on revamping the website is no more due to unexpected shakeups at the school. Nevertheless, a different course will take a look at the site and see what they can do, although they sadly won’t have as much time to deal with it.

arSTEMlogo1But there was a lot of good that happened. Big news for Paleoaerie is that we are now partnered with the Arkansas STEM Coalition, a nonprofit advocacy group for STEM education within Arkansas. This is really important for us because this means Paleoaerie now operates as an official nonprofit organization. What does this mean for us and you? It means that any donation to the site is tax-deductible. It also means that many grants that we could not apply for before are now within possible reach. Fundraising should be a bit easier from now on, which means we may be able to do much more in the upcoming future. One of the things we will be doing in the near future is a Kickstarter campaign to buy a 3D laser scanner so that we can start adding 3D images of Arkansas fossils onto the website, which will be available for anyone to use. One might ask why not use some of the cheap or even free photographic methods that are available. In a word: resolution. I’ve tried other methods. When one is attempting to make a 3D image of an intricate object only a few centimeters across, they don’t work well. If you want details to show up, you need a better system. Stay tuned for that.

logoPaleoaerie is also partnering with the Museum of Discovery and the University of Arkansas at Little Rock for a National Fossil Day event on October 11. Make sure to mark your calendars and come out to the museum to see the spectacle and diversity that can be found in Arkansas. There is much more than you think. We are also working with the museum on a new dinosaur traveling exhibit. It is very cool, so watch for it later this fall.

The last big news that happened recently is today’s Mystery Monday fossil. Someone brought me a fossil to examine a couple of weeks ago. The first amazing part of it is that is was actually a fossil. the vast majority of what people show me are just interestingly shaped rocks. This was a bona fide fossil. Not only was it a fossil, but a really cool one. The image below is a vertebra from a little seen animal in Arkansas and not at all for a very long time. The fossil is roughly 100 million years old, putting it in the Cretaceous Period. At that time, Arkansas was on the shoreline of the late Cretaceous Interior Seaway. Take a look at the image below and see if you can figure out what it came from. I’ll let you know what it is Friday. Thanks to Matt Smith for bringing this wonderful fossil to my attention. Come out to the National Fossil Day event and see it for yourself.

Picture1

How to Make Your Own 3D

In the last post, I covered good places to find 3D fossils. This post I want to cover how to make your own 3D images using photogrammetry. Photogrammetry is the process of turning a bunch of 2D photos into an interactive 3D image. Since I am not an expert on doing this, I am simply going to link you to a series of tutorials put together by Dr. Heinrich Mallison. Dr. Mallison describes himself as “a dinosaur biomech guy working at the Museum für Naturkunde Berlin.” If you would like to read more of his work, I suggest you check out his blog, Dinosaurpaleo, in which he blogs about his research. He also has links to a lot of his research papers and will happily send you pdfs of any other papers of his you want. Dr. Mallison is an expert on making 3D reconstructions using photogrammetry and has already done the legwork to give you all the information you need to get started.

Image

 

Getting the Right Photo

Photogrammetry tutorial 1 begins with the logical starting point: the equipment. He recommends getting a good DSLR camera with a Life View touchscreen, circular polarizing filter, good tripod, turntable, and a ring flash for optimal pictures. Also, don’t forget the scale bar and stickers. The stickers will be helpful if you have to take our photos in two sets (for instance, if you have to move the object between sets). This will require making two models and stitching them together, which will be aided by small stickers that will serve as easily findable common points so you can properly align the models.

Photogrammetry tutorial 2 discusses general suggestions on how to take good pictures that you can use for the 3D model. Here he gives advice, such as maximizing the F-number to increase depth of field, balancing your exposure, the use of HDR (high dynamic range) images, and proper cropping of the images.

 

Mallison's 3D CAD model illustrating good camera shots.

Mallison’s 3D CAD model illustrating good camera shots.

Photogrammetry tutorial 3 covers the use of turntables. He covers the type of specimens that work best, how to place the camera for the needed pictures and how to photograph with an eye for aligning the 3D models you create.

Photogrammetry tutorial 4 discusses techniques for photographing large, bulky specimens.

Photogrammetry tutorial 5 provides a ideo of the turntable method described in part 3.

Making the 3D Model

Part of a Diplodocus limb Dr. Mallison modeled.

Part of a Diplodocus limb Dr. Mallison modeled.

Finally in tutorial 6, Dr. Mallison finally gets around to actually building the model from the photos. If this indicates to you that getting good photos is essential to making good models, you would be correct. To add more to this, the writers of the blog Sauropod Vertebra Picture of the Week, or SV-POW, have a series of useful posts on how to take good photographs, manipulating them for good effect, making stereoscopic images, and much more great advice.

In this tutorial, Dr. Mallison discusses some of the programs that are available. He prefers Photoscan Pro from Agisoft. The downside to this program is that it costs $549, which is probably out of the price range for many people. The upside is that it is a versatile program designed for non-specialists. He discourages use of Autodesk 123D even though it is free because all of your work becomes the property of Autodesk 123D. He also states that others prefer Image Modeler, which is the professional version of Autodesk. It can do more than Photoscan Pro, but it will cost you much more. He also mentions VisualSFM and Meshlab, open source programs which together can be used to make 3D models and provides a link to a tutorial by a fellow paleontologist, Peter Falkingham, who tells you how to use those programs.

From there, Dr. Mallison goes into scaling and aligning the models. If you want to see some of the finished work, try here and here.

Other Options

Of course, this isn’t the only wayto make 3D objects. Photogrammetry is only way to make quality 3D images. Laser-scanning is another great way to do so. If you have a few thousand dollars, I might recommend the NextEngine 3D laser scanner. It is not as expensive as some of the other laser scanners and does quite a bit at a comparable or better quality. As a caveat, neither the photogrammetry nor the 3D laser scanning will create the most detailed images. If you want truly detailed, high resolution images, then you really need a computed tomography, or more commonly just called CT, scanners. The downsides to that is that CT scans do not preserve the color of the objects, so you lose surface details related to color, and they are hideously expensive. But at least they are not as expensive as synchotron scans. Synchotron scanners are similar to CT scanners, but are much more powerful and can create images with much greater detail, but with only five available scanners, probably not something your average paleontologist, much less a hobbyist, is going to ever see.

http://www.youtube.com/watch?v=dg76ovO5TvM

Once you have your 3D objects of course, there is always the next possibility: 3D printing! For that, contact your local high-tech Maker Spaces, such as the Arkansas Regional Innovation Hub. There are several places you can go to buy your own 3D printer, such as Quintessential Universal Building Device, or QU-BD, in Little Rock, AR.

Full Disclosure: I have no monetary interests or any other vested interests in any of the people or companies linked to in this essay.

Taphonomy Tuesday

Slide1Taphonomy Tuesday? What the heck is taphonomy, you ask? Taphonomy is the study of burial processes and all the changes that take place betwixt death and being collected as a fossil. One might also include the effect of sexiness in what fossils get studied and forgotten about, way more people are interested in tyrannosaurs than fossil mosquitos, for instance. Change comes to all things and paleoaerie is no exception. You may have noticed that the answer to Monday’s mystery fossil did not get posted on the blog last week, although it was posted on the Facebook page. That will be rectified today. But first, a couple of pieces of news.

Mystery Monday and Fossil Friday will be suspended for the summer so I can work on other aspects of the website. I would like to make some different posts and add more to the site. however, for those of you who are primarily interested in the fossils, they will return along with school, teachers, and homework, although hopefully a bit more fun than either doing or, even worse, grading homework (trust me, having been both a student and teacher, grading is almost always more painful than doing the assignments). In the meantime, you can look forward to more varied posts, the addition of a couple of things, such as a techno page for recommended apps and multimedia and an Amazon store in which you can peruse recommended items (and in a small way support the work of paleoaerie, which while free to you, is not to me). So I hope you will stick with me through these Darwinian changes and avoid the pitchforks and torches (ed. note: in keeping with the medieval theme of the picture, I thought about saying burning faggots, but so few people these days know that in olden times, faggot simply meant a bundle of sticks, language too evolves).

modlogoThe other big news is that I have started a collaboration with the Museum of Discovery in Little Rock to host a celebration of National Fossil Day in October. I am really looking forward to it and, between me and the museum educators at the MoD, we have a lot of ideas for things to do. I hope everyone can come out and enjoy the festivities and learn about fossils in Arkansas and beyond firsthand.

Platecarpus_skull

Platecarpus skull fossil at Plano West Senior High Photo Credit:Wesley Kirpach. Wikimedia Commons.

Now, for that fossil…Did any of you recognize this as the skull of a mosaaur, specifically that of Platecarpus? To picture a mosasaur, imagine a komodo dragon, replace the feet with flippers, and compress the tail so it is taller than it is wide (aka laterally compressed) so it looks more fish-like than lizard-like, and you have a pretty good view of a mosasaur. There is a reason for that. Komodo dragons are part of a group of lizard called monitor lizards, which are thought to be close relatives of mosasaurs and so are likely an excellent model for what the ancestral animal of mosasaurs looked like before they became aquatic.

Platecarpus. Wikimedia.

Platecarpus. Wikimedia.

Platecarpus was a carnivorous marine reptile that swam in the Cretaceous seas. While dinosaurs like Tyrannosaurus rex and Triceratops roamed the land, Platecarpus and its relatives patrolled the oceans. This is one of the most common mosasaurs, so much of what we know about them comes from fossil of this genus. It was smaller than many of the other mosasaurs. Some, like Kronosaurus, could reach up to 17 meters, but Platecarpus only averaged around 4-7 meters. Its name means “flat wrist,” alluding to the flippers, although it hardly distinguishes them from other mosasaurs in this regard. What did make them stand out from the other mosasaurs was a relatively shorter snout with eyes that faced more forward, so it probably had better stereoscopic vision, that is, it had better depth perception than most others of its kind. This may be why it had a shorter snout, to prevent the snout from blocking its field of view. Like other mosasaurs, Platecarpus had two rows of teeth on its palatine bones, forming the roof of its mouth. This arrangement actually isn’t all that unusual in lizards and snakes, it is really common in fish. The teeth (all of them, not just the palatal teeth) were pointed and conical, although not as sharp as some of its kin, indicating it went after small, soft prey, like small fish and soft invertebrates like squid or perhaps even jellyfish. They could have gone after larger prey like crocodilians do, but unlike crocodilians which have a strong skull capable of withstanding the forces of ripping a prey item apart, Platecarpus had a much weaker skull which would likely not have stood up to the stresses of the crocodilian death roll (this is when they grab a limb and spin until the limb is ripped off, the moral of the story is of course, never dance with a gator). The overall shape of Platecarpus is stockier than most mosasaurs. This would have had the effect of decreasing surface area relative to body weight, which could have increased its metabolism by holding in heat better.

KUVP1001. Mike Everhart. www.oceansofkansas.com

KUVP1001. Mike Everhart. http://www.oceansofkansas.com

One of the things that makes Platecarpus as a genus so interesting is the fossils that have been found with soft tissue preservation. In one, along with parts of the skin, parts of the trachea (windpipe) were preserved. Originally, they were interpreted as part of a dorsal fin, thus all the early pictures of mosasaurs with fins along their backs. However, it was quickly discovered what the traces really were. To his credit, Williston, the scientist who had reported in 1899 the traces as a dorsal fins was the one who published another short paper three years later saying he had made a mistake and the fossil really showed the cartilaginous rings found in trachea. The tracheal rings have also been interpreted as showing the branching point between the two lungs, which is important because it answered a question about their origins. Every researcher agrees that mosasaurs are lepidosaurs, the group including lizards and snakes, but what wasn’t known was whether or not mosasaurs were derived from aquatic lizards or from snakes. The discovery of a trachea showing two lungs confirms the origin within lizards (snakes only have one lung). It may still be that snakes evolved from mosasaurs, but that is not very likely.

The other piece of soft tissue that has been found is the outline of the tail showing a lobe on the tail forming a very shark-like tail. Until this time, many people had thought the mosasaur swam with an eel-like motion, but the tail and the deep caudal fins indicate a much faster shark-like swimming motion. This in turn has caused people to reevaluate the view they were slow ambush predators, supporting a more active predatory forager. Whether or not other mosasaurs had this fin is currently unclear, so there may have been specializations within this group not seen in the larger mosasaur family. Another such example is the discovery of what has been interpreted as thicker eardrums, which may have allowed them to dive to deeper depths.

Tail fluke preserved around skeleton. Credit: (top) Photograph (by Johan Lindgren), (centre) sketch indicating the bones and skin structures preserved (by Johan Lindgren), and (bottom) life reconstruction (by Stefan Sølberg) of Prognathodon sp.

Tail fluke preserved around skeleton. Credit: (top) Photograph (by Johan Lindgren), (centre) sketch indicating the bones and skin structures preserved (by Johan Lindgren), and (bottom) life reconstruction (by Stefan Sølberg) of Prognathodon sp.

The southwestern corner of Arkansas was at the edge of the Late Cretaceous Western Interior Seaway, so we have several fossils of them in places like Clark, Hempstead and Howard counties, although you can find them all over the world in the right type of rocks. You can find them in the Brownstone and Marlbrook Marl Formations. These formations are indicative of warm, shallow seas, much like the Bahamas today, which considering the locations, shouldn’t come as too much of a surprise to people. If you were taking a nice vacation on the warm Cretaceous beaches 80-85 million years ago, you might have tried fleeing into the water to avoid the dinosaurs on the beach, but you would have been no safer in the water.

I would like to thank Rachel Moore, who supplied a lot of the research involved in putting this post together.

Mystery Monday

Mystery Monday

For today’s Mystery Monday fossil, see if you can identify this creature.

Fossil Friday

It’s Friday, time for the answer to Monday’s mystery fossil. Were you able to identify it?

enchodusoceansofkansasThese fossils are from a fish called Enchodus, the “saber-fanged herring.” Teeth of Enchodus are commonly found in the Cretaceous-aged rocks in southwestern Arkansas, especially near Malvern and Arkadelphia in the Arkadelphia and Marlbrook Marl Formations, up into the Paleocene rocks of the Midway Group a bit farther north. In other places you can even find them in rocks of Eocene age, although you will have much better luck in the Cretaceous rocks. At this time, southern Arkansas was shallow to coastal marine. Go to the Bahamas, imagine Enchodus, mosasaurs, plesiosaurs, and plenty of sharks in the water around the islands and you would have a good picture of the landscape back then. They were abundant at the end of the Mesozoic Era and survived the asteroid impact that rang the death knell for many animals, including the non-avian dinosaurs. But they never regained their prominence as a key member of the marine ecosystem, eventually dying out completely in the Eocene sometime around 40 million years ago (the Eocene lasted from 55 to 34 million years ago).

2008-11005%20AncientSeasMural_for_NPS_1200

The fish reached sizes over 1.5 meters, which makes them on the large side, but not really big, considering there were mosasaurs in the same waters that surpassed 10 meters. Still, with fangs longer than 5 cm, they would not have been fun to tangle with. They were clearly effective predators on smaller fish and possibly soft animals like squid. At the same time, fossils have been found showing they were themselves prey for larger predators, such as sharks, the above-mentioned mosasaurs, plesiosaurs, and even flightless seabirds such as Baptornis. Baptornis was a toothed, predatory bird, but as it only reached 1 meter or so, it would have only been able to hunt young Enchodus. So like many of us today, Baptornis was always up for a good fish fry.

Hesperornis, a larger version of Baptornis, and a few Enchodus feeding on some herring-type fish. Picture by Craig Dylke.

Hesperornis, a larger version of Baptornis, and a few Enchodus feeding on some herring-type fish. Picture by Craig Dylke.

Enchodus is often called the “saber-fanged herring,” although it is unrelated to herrings. So what then was it? Herrings are what is known as forage fish, meaning they are mostly prey items of larger fish and other animals. Most of the fish called herrings are in the family Clupeidae in the groups Clupeiformes, which includes such well-known fish as sardines and anchovies. Enchodus, on the other hand, has been placed into the group Salmoniformes, which includes trout, char, and of course, salmon. When one typically thinks of trout and salmon, one doesn’t think of bait fish, they think of the fish that eat the bait fish. Thus, Enchodus would better better described as a fanged salmon (they were a bit large to call them fanged trout).

 

 

Mystery Monday

Mystery Monday

Time for another Mystery Monday. Teeth like this are reasonably common in Arkansas rocks of a particular age. See if you can tell what it is.

Puma concolor, The Ghost Cat of Arkansas

I have a special treat today. I am pleased to announce our first guest post on paleoaerie. John Svendsen found a set of puma fossils when he was in high school. Today, he shares with us what he has learned about them since that time.

“Masters of stealth, they seldom step from the shadows.”

puma7

For many years people have reported sightings of mountain lions and pumas in Arkansas yet the Arkansas Game and Fish Commission has repeatedly disputed such claims.  Rather the AGFC believes that any such sightings are simply of feral mountain lions released from captivity that should be shot on sight.   Why would the AFGC deny the obvious – that living, breeding mountain lions can be found in the state?  As noted by Bryan Hendricks (2009), if the AGFC acknowledges the presence of a sustainable population of wild mountain lions in Arkansas, then it will be compelled to draft a management plan to assure their survival. That means the agency will have to devote money and manpower to compile a population estimate, and then hold meetings to get public input for management options.  By virtue of the mountain lions endangered status, a management plan would likely seek to increase or maintain its population – obviously,  deer and turkey hunters and livestock farmers would feel at risk having this predator protected by law and would seek litigation or legislation to assure that they can continue to kill mountain lions on sight.

Fortunately there was a time tens of thousands of years ago when mountain lions roamed the state without fear of man.  This ancient pre-historic cat roamed the hills and savanna of North America for millions of years in the company of dire wolves, saber-tooth tigers, giant sloths, peccaries and cave bears.  Just as these mammals became extinct so did the mountain lion and by the late Pleistocene (approximately 10-12,000 years ago) no mountain lions survived in North America.  Fortunately a few mountain lions from South America migrated northward and reestablished living populations throughout much of North America.  The mountain lions we see today in Arkansas are the ancestors of this small migrating band from South America.

The mountain lion, known scientifically as Puma concolor, occupies a vast range of ecological zones as diverse as desert, tropical rain forest and alpine steppes (Kurten, 1976).  Cats such as P. concolor are poorly represented in the fossil record and taxonomic research on felids is somewhat incomplete.   Much of what is known about their evolutionary history is based on mitochondrial DNA analysis and still there are substantial confidence intervals in suggested dates and lots of room for error (Culver et. al, 2000).    We do know however that pumas come from a very long line of evolution with episodic bursts of development and diversification that can be traced 40 to 60 million years ago through the late Tertiary period.

These prehistoric creatures are large cats with powerful bodies.  Males can weigh 250lbs. (103 kg) with a length of 4.5 feet and a 3 foot tail. It is the second largest cat in the Americas, after the Jaguar, and it is the fourth heaviest cat in the world, after the Tiger, Lion, and Jaguar.  It is a solitary cat and rarely is seen in the presence of other cats except during breeding and the raising of a litter.  It is an apex predator and is specialized for the task:  binocular vision, acute sense of smell and sight, retractable claws, strong canine teeth and masseters, and powerful forearms and legs allowing it to leap 40 feet, jump 15 feet high and pounce from a height of 5-story building.  Few animals are capable of outrunning, alluding or surviving a puma attack — fortunately they prey chiefly on the weak and injured and thus strengthen the gene pool of those on which they prey.

ImagePuma fossils are rare in the fossil record of Arkansas and have only been identified from:  Conard Fissure and Svendsen Cave (see Figure 1).   Conard Fissure is a geologic feature in Northern Arkansas where a deposit of Pleistocene fossils were discovered in 1903 when Waldo Conard was searching through fissures and crevices on his land in search of lead.  In one of these fissures he found a “bone mine” with thousands of bones preserved in limestone – thirty-seven genera and fifty one species, of which nearly half are extinct.  The original excavation of the fissure was performed by Barnum Brown, the initial discoverer of Tyranosaurus rex, and yielded an assortment of small animals and rodents but also larger mammals including peccary, deer, bear, wolves and foxes.    This entombment of a wonderful assemblage of mammal is accounted for by the fact that the fissure long remained open and was inhabited in the late Irvingtonian (240,000-300,000 years BP) by many carnivorous animals.

puma2bSvendsen Cave yielded the remains of a puma following its discovery in 1974 by two young spelunkers, John Svendsen and Ola Eriksson who were still in high school at the time (Pluckette, 1975). The cave is developed in dolomitic limestone of the Everton Formation and contains over a mile of mapped passage and three stream systems.  The skeletal remains were encased in a travertine ledge only 500 feet from the entrance of the cave (see Figure 3) but passage to the remains included a low strenuous crawl and squeeze, a siphon and two climbs.  The puma is presumed to have entered the cave from an entrance now unknown and may have been washed to the depositional site.

puma3Svendsen Cave proved to be a marvelous find as the remains were chiefly intact and materials that were recovered included:  partial skull with teeth, partial left mandible with teeth, left humerus, scapula, ribs, and vertebrae (see Figures 4-6).  No exact date can be assigned to the Svendsen puma albeit antiquity is evident given mode of occurrence and lack of metastable materials in the skeletal remains.  At the depositional site, the bone-bearing travertine is undergoing dissolution and the sediments are being removed by a nearby stream.   Thus a climatic regimen of less than the present level of precipitation which allowed formation of the travertine ledge is indicated for the cave area during deposition of the puma (Pluckette, 1975).   Given the dimensions of the dentition, mandible and humerus obtained from the site a dating of the Middle Pleistocene, Ionian stage (781 to 126 thousand years ago), is presumed albeit the fossils could be much older.

puma4

puma5puma6No other sites in Arkansas have been discovered which have yielded prehistoric fossils of the P. concolor albeit more are likely waiting to be found in the future.

            Conclusion

P. concolor is still a resident of Arkansas.  In most of North America P. concolor is currently classified as an endangered species and protected, whereas in Arkansas it is currently legal to shoot and kill P. concolor upon sight as the Arkansas Game and Fish Commission has declared, “All cougars (mountain lions) in Arkansas are considered to be escaped pets or the feral progeny of escaped pets and hence it is legal to kill such animals.”  The future of this magnificent big cat lies at the mercy of people who must preserve its natural environment and allow it free passage.

References

Brown, B. 1908.  The Conrad Fissure, a Pleistocene bone deposit in northern Arkansas; with descriptions of two new genera and twenty new species of mammals.  Am. Mus. Nat. Hist. Mem. 9: 155-208.

Culver M1, Johnson WE, Pecon-Slattery J, O’Brien SJ.  2000.  Genomic ancestry of the American puma (Puma concolor).  Journ. of Heredity.  91:  186-197.

Hendricks, B. 2009. “Arkansas sportsman: AGFC not lying just avoiding furball over big cats.” Arkansas Democrat-Gazette. Feb. 8, 2009.

IUCN, 2010. “The IUCN Red List of Threatened Species” (On-line). Mammals. Accessed March 29, 2011 at http://www.iucnredlist.org/initiatives/mammals.

Johnson, W.E.,  Eizirik, E., Pecon-Slattery, J., Murphy, W.J., Antunes, A., Teeling, E. and O’Brien, S. J.  2006. The Late Miocene radiation of modern Felidae: A genetic assessment. Science 311:73-77

Kurten, B. 1965.  The Pleistocene felidae of Florida.  Bull. Florida State Mus. 9(6):  215-273.

Kurten, B.  1976.  Fossil Puma (Mammalia:  Felidae) in North America.  Netherlands Journ. of Zoo.  2694):  502-534.

O’Brian, S. J., and Johnson, W. E. 2005. Big Cat Genomics. Ann. Rev. Genomics Hum. Genet. 6: 409-29

Pluckette, W. L. 1975.  An occurrence of the Puma, Felis concolor, from Svendsen Cave, Marion County, Arkansas.  Ark. Acad. Of Sciences, Vol. 29, p. 52-53.

Turner, A. 1997. The Big Cats and Their Fossil Relatives: an Illustrated Guide to Their Evolution and Natural History. New York: Columbia University Press.

Young, S.P. and Goldman, E.A.  1946.  The puma, mysterious American cat.  Am. Wildlife Inst. 358 p.

The answer to last week’s Mystery Monday

The answer to last week’s Mystery Monday fossil was supposed to be posted last Friday, which didn’t get done. I am going to have to make some changes in the schedule or change the way I do things because I simply don’t have the time to post a new fossil and give a full discussion of it every week and do anything else. So if you have any suggestions on how you think changes would be best done, let me know. I could cut back to every two weeks; still give a fossil every week, but not go into much discussion of what it is each week; or some other possibility. Let me know your preferences.

At any rate, for the last Mystery Monday fossil, I posted this little fossil.

goniatitesAR

What we have here is a little goniatite ammonoid that has been pyritized, meaning that the shell has been replaced with pyrite. This type of fossilization is pretty common. As the bacteria eat the organism, some of them will release sulfur, which then combines with the hydrogen in the water to form hydrogen sulfide. When it precipitates out of the water, it usually does so as pyrite. In some cases, like in this one, the pyrite crystals can replace the organism so well that it makes a detailed copy of the original. For obvious reasons, this type of fossilization is called replacement, in which the original oranism is replaced with a mineral, be it calcium carbonate, iron, opal, quartz, or in this case, pyrite.

So what are goniatite ammonoids? Ammonoids are part of the group (often called phylum, but for various reasons the specific rank of the group is often no longer used) Mollusca; which includes snails, (gastropods), clams (Bivalvia, meaning two shells, or less commonly, Pelecypoda, meaning hatchet foot), and the Cephalopods.

Cephalopod diversity. Tolweb.org

Cephalopod diversity. Tolweb.org

Nautilus. Arkive.com

Nautilus. Arkive.com

Cephalopods include the squids and octopuses, as well as the Nautilus, which is what concerns us here. If you aren’t familiar with a nautilus, think of a squid inside a spiral shell. Squids used to have shells, either long, straight ones or curved and coiled ones. The only one left of these shelled squid is the nautilus. However, you can still see the remnant of the shell in an internal structure called a squid pen, or in the case of cuttlefish, the cuttlebone. In either case, they are the last vestiges of the external shells we see in the nautilus and the ammonoids.

Squid anatomy. Biologycorner.com

Squid anatomy. Biologycorner.com

During the Paleozoic and Mesozoic Eras, ammonoids were much more common and much more diverse. During the Jurassic and Cretaceous Periods during the Mesozoic, the type of ammonoids that were most common were the more familiar fossils known as ammonites. Goniatites were much earlier and lived during the Paleozoic.

Nautilus shell. Wikimedia.

Nautilus shell. Wikimedia.

How does one tell the difference between the different types of ammonoids? Look at the internal partitions. These partitions, called septae, separate the chambers within the shell. As the animal grows, it adds material to the edge of the shell, making it larger and larger at that end. Once the shell gets big enough, the animal will create a new partition in the back, separating the current body chamber from the earlier, smaller one. A small hole is left in the septae so the siphuncle, a thin tube, can pass through, connecting all the previous chambers. The siphuncle could then be used to pump water or gas in and out of the chambers so they could be used as ballast, allowing fine control of their buoyancy.

ammonoidags1The septae in the nautiloids (the group of ammonoids containing the modern nautilus) are all very smooth, forming a nice curve. The nautiloid septae curve inwards, whereas the ammonoids curve outwards to some extent. Ammonoid septae are also much more complex. Goniatites, the earlier forms, had simple wavy septae. Ceratitic ammonoids created septae in which the waves were more jagged, with what often looks like little saw-toothed crenulations. The later ammonites (many people call all of them ammonites, but this term more properly only refers to the more derived subset) had very complex septae, showing several smaller wave patterns overlaid upon the larger wave.

ammonoidags2

Ammonoids were very common in the Paleozoic and Mesozoic and were found throughout the oceans of the time. They typically lived in shallow marine environments all over the world. They also evolved rapidly, so new species tended to appear and disappear on a fairly regular basis. This abundance, diversity, and rapid turnover make them prime index fossils. Index fossils are those fossils which are useful for dating the rock layer and correlating the layer from one spot to another. Using index fossils allows us to piece together a complete sequence of events even if there is no one place that has the entire sequence of rocks preserved. As a result, any fossils that can be used as index fossils become very important to people trying to figure out the history of life on earth, such as this little ammonoid. If you want to find one for yourself, look in almost any of the limestone or chert formations in the Ozark mountains. There are plenty.

Mystery Monday

Mystery Monday

This week’s fossil is a pretty little coiled animal. Can you guess what it is?

Taking a Bite Out of Fossil Friday

My apologies for getting this out so late. But now that we’re here, could you tell what the mystery fossil for this week was? It was a very unusual creature. Falcatus_falcatus_640

Peafowl, male and female. Wikimedia.

Peafowl, male and female. Wikimedia.

The creature in the picture is a representative of an early shark called Falcatus. It was a very strange shark, in which the males had a forward-pointing spike on its head. This is one of the earliest examples of sexual dimorphism in the fossil record. Sexual dimorphism is when the male and females look different. Humans are sexually dimorphic in a variety of ways, but the classic example is the peacock with its extravagant tail. They are so dimorphic that many people do not even realize the term peacock only applies to the male of the peafowl species. The females are called peahens.

Falcatus reconstructed. Wikimedia.

Falcatus reconstructed. Wikimedia.

Ozarcus. The fossil itself. AMNH.

Ozarcus. The fossil itself. AMNH.

Falcatus was chosen this week because of an interesting shark fossil found in 325 million year old limestone near Leslie, AR. The fossil was recently published and got a lot of press. Pictures of the fossil itself show what appears to be little more than a couple of lumpy concretions stuck together. There is little there that resembles anything like a shark. At least, until you look inside. A concretion is an inorganic structure consisting of layers of minerals that have been precipitated around a central core, much like a rocky onion. Oftentimes, a fossil lies at that core and served as the basis upon which the mineral precipitation got started. So one never knows what one will find cracking open a concretion. It may be nothing more than concentric mineral bands, or it may be an exquisite fossil preserved for the ages. In this case, the scientists got lucky. Not only was there an exquisite fossil, but one in which few had ever seen before: the skeletal structure of an early shark’s gill basket.

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A 3D reconstruction of the skull of Ozarcus mapesae. The braincase is shown in light grey, the jaw is shown in red, the hyoid arch is shown in blue, and the gill arches are shown in yellow. ©AMNH/A. Pradel

The researchers named the fossil Ozarcus mapesae, for the Ozarks in which it was found and for Royal and Gene Mapes, geology professors at Ohio University. The Mapes are also paleontologists and have collected a large number of fossils, one of which happened to be this curious-looking concretion. Small teeth on the exterior pointed to possibly more interesting material inside, so they CT-scanned it, which revealed the remains of the head of the shark. But to get better detail, they had to use a synchotron. This technology is new and expensive enough that it was not possible to look at the fossil this way until recently (a good example of why we preserve fossils in museums, you never know when future technology will allow examination in ways never thought of before).

Placoderm anatomy. Wikimedia.

Placoderm anatomy. Wikimedia.

The gill basket goes by many names, the branchial basket, branchial arches, gill arches, etc. but they all refer to the skeletal supports for the gills. To the shark, they are important for holding up the gills and forming the path for water to flow over the gills so the shark can breathe. For us, they are important because the arches evolved into a variety of structures, primarily the jaws and hyoid, a small bone in the throat to which the back of the tongue is attached. Because of the importance of jaws, the evolution of those structures has been a big topic of interest. The traditional view has been that the first jawed fish, the placoderms, evolved into the early precursors of the sharks, which then evolved into the early bony fish, the osteichthyans. The sharks then were expected to have a more primitive structure than bony fish. This story makes sense, given that the order of appearance in the fossil record pretty much matches what we would expect and the skeletal structures look more primitive in sharks than bony fish. Of course, despite the common view that sharks are relics of a bygone age, they have had over 400 million years to evolve after they split off from bony fish. How likely is it that they would have retained such ancestral characteristics for all this time? To answer that question, we can look at the fossil record to tell us what they were like at the earliest stages.

images (2)The big problem with examining the fossil record of sharks is that sharks are chondricthyans. They do not make bone. Other than the teeth, the skeleton is supported by a simpler set of calcium phosphate crystals. Unlike bone, which has a very structured arrangement of crystals and connective tissue, the bones in sharks are made of cartilage and a haphazard set of disorganized crystals, which fall apart shortly after the animal dies. Thus, finding any fossils of sharks that contain more than the teeth is extremely rare. Finding ones in which everything is still in place is almost impossible. Fortunately, over a long enough period of time, even the almost impossible will happen eventually. That is the thing with large numbers and vast amounts of time, our perception of what is unlikely doesn’t really work. For instance, given a 1 in a million chance that a tweet on Twitter will have something requiring the security team to deal with, that still gives them 500 tweets every single day. That “almost impossible” fossil was found with Ozarcus. This fossil provided our first look at what the throat of a primitive shark actually looked like.

Let’s have a bit of background to cover what we have known of early jaw evolution up to this point. Placoderms, armored fish from the early Paleozoic Era, were the first animals with jaws. The jaws themselves appear to develop from the first gill arch, according to a lot of embryological studies on modern animals. f26.10

The studies haven’t really answered where the bone came from though.  In placoderms, it is pretty clear the armor came from modifications of the dermis, the basal layer of the skin. But they also have internal bone forming their skeleton. Modern sharks have no bone other than teeth and bony fish have jaws made from that dermal bone. In addition to the origins of the bone, there is the matter of how the bones are attached to the skull. The upper jaw is formed by a embryological structure called the palatoquadrate (the top part of the first gill arch), so named because bones called the palatine and quadrate form from it. The bottom jaw forms from what is called Meckel’s cartilage (the bottom part of the first gill arch). In modern fish, the palatoquadrate is braced against the skull only at the front, with the back unattached. The jaw joint itself is attached to a bone called the hyomandibular, which forms from the second gill arch. The hyomandibular acts like a swinging pivot, allowing the jaw to open very wide. When the jaw joint gets pulled forward, the back of the upper jaw can move down, using the point where the front part is braced as the pivot point. Sharks take this to an extreme, not bracing the upper jaw on anything at all, with the jaws attached solely by the hyomandibular bone (the “hyostylic” joint) allowing both the upper and lower jaw to move forward when they open their mouths. So when you see that shark opening its jaws and it looks like they are coming right out at you, they really are. For a great example of a hyostylic jaw joint, check out the goblin shark.

Unfortunately, when we look at the earliest fossil sharks and bony fish, both of them show a jaw in which the upper jaw is braced against the skull in both front and back (the “amphistylic” joint). So it doesn’t tell us much about how the sharks fit into the sequence. One might say that it seems logical to think the bony fish came first, loosening the jaw in the back and then the chondrichthyans took this one step farther. But surely, others might say, the fact that bony osteichthyans have a more advanced bony skeletal structure means they would have to have come later, right? Here again, the fossil record doesn’t help here because the earliest representatives of both groups appear close enough in time that it cannot be strongly stated which came first.

That is where things were, until 2013, when the fossil record started answering these questions. A placoderm called Entelognathus was published in 2013. This fossil was of great interest because it showed the structure of the jaws in great detail. Entelognathus had a jaw that looked very much like an osteichthyan. This fossil was 419 million years old, so it was likely too late to be ancestral to either chondrichthyans or osteichthyans, but old enough to be very close to the ancestral form. What Entelognathus tells us is that the bones forming the jaws in placoderms was already like those seen in modern bony fish, indicating that sharks would have started out with bone, but lost it during their early evolution. Of course, since sharks don’t have bone, this was hard to demonstrate on sharks, so the question was still unsettled.

What Entelognathus says about fish relationships. Palaeontology: A jaw-dropping fossil fish Matt Friedman & Martin D. Brazeau Nature 502, 175–177 (10 October 2013) doi:10.1038/nature12690

What Entelognathus says about fish relationships. Palaeontology: A jaw-dropping fossil fish. Matt Friedman & Martin D. Brazeau Nature 502, 175–177 (10 October 2013) doi:10.1038/nature12690

 

Outside of the actual jaws themselves, there are all the other support structures around the jaw, such as the hyoid bone. Many of these structures are formed from the next few gill arches (earlier jawless fish had at least seven gill arches, so using a few to make the jaws and throat still leaves plenty for gills). The skeletal structures in bony fish that support the gill arches form a fairly simple chevron, or wide v shape, whereas the sharks have a slightly more complicated structure. But if finding fossils of shark skeletal structures is rare, finding one with tiny gill arch supports still in position is almost impossible. There is where Ozarcus comes in, because it is here that the almost impossible becomes reality. Once the researchers were able to see inside the fossil with the synchotron, they were able to see preserved gill arch supports in position. That position resembled the simple chevron shape of modern osteichthyans.

Gill arch supports in Ozarcus are similar to bony fish (right) and not the condrichythyans (left). Pradel A., Maisey J.G., Tafforeau P., Mapes R.H. and Mallatt J. (2014) A Palaeozoic shark with osteichthyan-like branchial arches. Nature DOI: 10.1038/nature13195

Gill arch supports in Ozarcus are similar to bony fish (right) and not the condrichythyans (left). Pradel A., Maisey J.G., Tafforeau P., Mapes R.H. and Mallatt J. (2014) A Palaeozoic shark with osteichthyan-like branchial arches. Nature DOI: 10.1038/nature13195

Thus, between Entelognathus and Ozarcus, we can confidently assess the development of jaws as having started in placoderms with primitive, osteichthyan jaws. We have evidence of the bony origins of the jaws from Entelognathus and evidence from the gill arches from Ozarcus, so we now have plenty of evidence to strongly support the claim that the chondrichthyans are not in the evolutionary pathway to modern jaws at all. They are an offshoot that actually lost bone to form a more flexible skeleton for some reason. Whether it was mechanical advantage for their lifestyle, such as increasing flexibility, or a reduction in mineral storage, who can say.

This new view of jaw evolution demonstrates that the common view of sharks as being evolutionary relics is wrong. Far from being primitive, they evolved throughout the millenia to the modern sharks we see today, changing the shape and development of their jaws and throat as they evolved from the primitive condition seen in early bony fish into the efficient predators of today. But then, they have been separated from the lineage that led through bony fish up through the early tetrapods all the way to us for over 400 million years. Why would anyone think that in all that time, they stayed still evolutionarily? Even if they look much more similar to their ancestors than we do, they have evolved too. Nothing stays still.